Quarantine Cruising: Oceanographic Cruises During COVID

In early May of 2021, two faculty members and four students from our department set out for an Arctic research cruise. Led by faculty member Prof. Rob Mason, the group spent two weeks quarantining on the remote island of Unalaska in the Aleutian chain before departing on a three-week oceanographic cruise.

The Arctic, defined as the region of the Earth within the Arctic Circle located at approximately 66° 34’ N, contains several seas and parts of the United States, Canada, Scandinavia, Iceland, Greenland, and Sweden. The region is unique, with cold temperatures, varying snow and ice cover, and seasonal sea ice. Prevailing water and air currents facilitate the transport of many long-range pollutants to the Arctic, and the region is heavily impacted by climate change. Global warming has caused the loss of annual and seasonal sea ice cover, increased river discharge, and thawing of permafrost. Many climate models predict greater warming in the Arctic than the global average, compounding the effects of these changes. One of the most effective ways to gather data about these ecosystems is through oceanographic cruises.

Multi-week cruises are the backbone of much research in the oceanographic field. The occurrence of these cruises can often be reduced to a few sentences in the methods section, but the execution requires years of work prior to departure. Planning for this trip began in 2017, when Prof. Mason first submitted a proposal to the National Science Foundation (NSF) along with co-investigator Dr. Dave Kadko of Florida International University. He requested funding for a cruise to the Arctic to examine the role of ice in controlling mercury levels in seawater. 

While the RV Sikuliaq, operated by the University of Alaska Fairbanks, can typically host 20 scientists, due to the COVID-19 pandemic, the cruise was limited to 10. COVID-19 required other changes to the typical cruise experience, too. Everyone on the ship had to undergo a two-week quarantine and two COVID-19 tests prior to boarding. The UConn science party quarantined in Unalaska, Alaska, commonly known as Dutch Harbor. During the quarantine, the group hiked to several different sites on the island, including two sites of WWII bunkers and two different mountains. 

The UConn crew hikes Mt. Ballyhoo in Dutch Harbor. From left to right: Lauren Barrett, Emma Shipley, Penny Vlahos, Hannah Inman, Yipeng He, Rob Mason. (Photo: Yipeng He)
The view from the 03 deck of the Sikuliaq where continuous air sampling instruments were located. During the summer, the sun never sets in the Arctic, but dips close to the horizon before beginning to rise again. This photo was taken near midnight. (Photo: Emma Shipley)

After boarding the ship, the group settled in for three weeks of data collection. To meet research objectives, UConn’s team collected air, water, snow, and ice samples. One unique aspect of cruises to the Arctic is the ability to collect samples from sea ice. During this cruise effort, the science party sampled at 5 different ice stations within the marginal ice zone, the region of seasonal sea ice surrounding annual ice. Sampling on sea ice is a carefully orchestrated process. The ship’s captain and crew meticulously select a section of ice that looks large and stable enough to support several members of the science party. Scientists are briefed on the safe places to walk on the ice, and the Science Operations crew members test the ice before allowing the science party to sample. Equipment and people are typically transported between the ship and the ice using a “man-basket,” or a cage attached to a winch. While on the ice, the science party uses ice-corers to collect ice cores, large augur drills to create holes for collecting ice brine and under-ice water, and shovels for snow. The Arctic environment can be harsh and dangerous, and a team of crew and scientists work as look-outs on the bridge for any potential threats, such as roaming polar bears. In fact, the UConn team saw four different polar bears while on the cruise, three of which were visible while ice sampling was taking place. Seeing polar bears in the wild is a truly unique experience, and observing these animals in their natural habitat was commonly mentioned by the science party as one of their favorite parts of the cruise. Rob adds, “Seeing the bears up close was definitely a highlight. Sampling in the ice and getting out there off the ship was special, but overall being in such a remote beautiful place where very few people go was a highlight.”

The science party poses on the ice in front of the RV Sikuliaq. From left to right, Ethan Roth (Sikuliaq Science Operations Manager), Marissa Despins (Wright State University), Yipeng He (UConn), Doug Hammond (University of Southern California), Laurie Juranek (Oregon State University), Steve Roberts (Sikuliaq Science Systems Engineer), Mark Stephens (Florida International University), Rob Mason (UConn), Emma Shipley (UConn), Hannah Inman (UConn), Penny Vlahos (UConn), Lauren Barrett (UConn), Dan Naber (Sikuliaq Science Systems Technician). (Photo: Siyu Chen)
Ice sampling, as seen from the Sikuliaq. Shown in the foreground is the “man-basket” that is used to transport personnel and supplies between the ship and the ice. In the background, Rob Mason and Dan Naber take an ice core and Ethan Roth, Laurie Juranek, and Emma Shipley take brine and under-ice samples. (Photo: Lauren Barrett)
Two polar bears observe the Sikuliaq from a nearby ice floe. (Photo: Siyu Chen)

Meet Dr. Claudia Koerting, a Woman who Wears Many Hats

Dr. Claudia Koerting has been working in her current professional faculty position for the past 16 years, although she’s had various positions at UConn since 1997. Almost every graduate and undergraduate who gets a degree in the Department of Marine Sciences has had the opportunity to work with Claudia. Her current position includes serving as the marine science undergraduate coordinator and the honors advisor for the major, coordinating the Early College Experience (ECE) Marine Sciences Program, teaching several courses at Avery Point, and maintaining and helping students use the instrumentation in the SMALER (Suspended Matter Analytical Laboratory for Education and Research) Lab. 

Claudia graduated from the University of Rhode Island (URI) with a double degree in chemistry and microbiology, received a Master’s from UConn in Oceanography, and completed a PhD in pharmaceutical sciences at URI. Her interdisciplinary background allowed her to work on a variety of research projects, from Lyme disease to marine pathogens to the inhibition of bacteria that degrade oil and fuel. She emphasized the importance of interdisciplinary projects: “I like to combine all my backgrounds, cell biology, chemistry, and microbiology, (in the context of marine sciences) because any of them alone is boring to me.” She is particularly apt at analytical work, which made her the perfect fit to run the SMALER Labs at Avery Point. After taking on the role of a PhD level academic assistant for DMS in 2005, she has continued to add to her responsibilities by naturally filling vacuums she has observed, such as oversight of undergraduate lab courses. Of her career path, she says “It’s a great example of how everything you’ve done in your life, no matter how irrelevant it seems at the time, can be relevant to your future work.” When asked what a typical day on the job looks like, she laughs and says there is no typical day. 

Her favorite parts of the job center around helping students grow as scientists and researchers. “A big part of what I love to do is connecting undergraduates and high school students with research and ideas. I get to see them coming in as freshmen, and I get to see them going out as seniors. At the end of the day, when I look back and know that I’ve helped someone in some way, then I feel like I’ve done my job. It’s gratifying.”

Outside of work, Claudia has a passion for being outside, particularly sailing. She loves to be on the water year-round, but when she cannot get out onto the water, she also has a passion for hiking. 

Claudia driving the skiff (photo: Charlie Woods)

Dierssen Hosts the NASA PACE Science Team at Avery Point

Professor Dierssen hosted the 3-day Plankton Aerosol Cloud and ocean Ecosystem (PACE) Science and Application Team Meeting at the University of Connecticut, Avery Point in a hybrid format with 32 in-person attendees and 77 virtual attendees. Twenty-two in-person and twenty-eight virtual presentations were given, including 5 minute lightning talks from each science and application team member.  The hybrid meeting format facilitated a best-of-both-worlds opportunity to collaborate, to resolve sticking points, and to build partnerships, while sharing mission and programmatic updates and while advancing the science and societally relevant applications of the PACE mission.

The PACE satellite mission is slated to launch in January 2023 with new hyperspectral and polarimetric sensors to revolutionize the way we monitor the oceans and atmosphere from space. 

In-person attendees of the PACE Meeting pose on the Avery Point Campus. Dierssen is third from the left. (Photo: Oskar Landi)

Professor Ed Monahan’s “Message in a Bottle” reaches Russia

(This story includes excerpts from “From Galway Bay to Kola Bay – Research bottle set adrift 40 years ago reaches Russia” published in the Irish Examiner, 10/25/2021)

A message in a bottle cast into the ocean off Ireland’s West coast roughly 40 years ago has turned up in Murmansk, Russia last week – some 4,000km away. The bottle was discovered at Kola Bay, an estuary north of the port city of Murmansk, the biggest city in the Russian Oblast of the same name. Contained within the bottle was a small yellow postcard bearing the address of University College Galway – now NUI Galway’s – Oceanography Department, along with a request to return the bottle with details of where and when it was found. Current members of NUI Galway’s faculty identified the bottle as part of a drifter program run by Prof. Ed Monahan in the late 70s and early 80s. Dr. Monahan previously worked at NUI Galway, but is now emeritus faculty at the University of Connecticut. While at NUI Galway in the late 1970s and early 1980s, he conducted research with ‘drifters’ off Ireland.

The bottle, looking a little worse for wear after decades at sea (Photo: Ed Monahan via NUI Galway).

While it is possible the bottle was picked up by a fishing vessel somewhere in the North or the Norwegian Sea and discarded close to the Russian coast, Dr. White, an oceanographer NUI Galway, believes the most likely explanation is that the bottle simply drifted there via natural currents. “Currents in the Rockall Trough region will flow generally into the northern North Sea area and across to the Scandinavian side and beyond into the Arctic. However, the route would be determined by the winds and at any locality the weather systems so the route could have been very indirect,” Dr. White said.

The man who found the bottle in Kola Bay got in touch with NUI Galway’s College of Science and Engineering by email last week to notify them of his discovery and attached some photographs of it. The photographs appear to show that the serial number on the card – which would allow NUI Galway’s researchers to learn exactly where and when the bottle was sent to sea – has faded over time. Attempts to get back in touch with the man who discovered the bottle have so far been unsuccessful, but Dr. White’s Russian-speaking wife plans to send him another on behalf of the University in a bid to learn more about the bottle’s long journey from the west of Ireland to the Northwest of Russia.

Speaking on the re-emergence of one of his projects, he said “For this drift-bottle to be found 35 years after I returned from Ireland, and 15 years after I retired to emeritus status at UConn, was like “a welcome echo from the past.” I am pleased that my former colleagues in NUI, Galway, remembered my role in this study, and flattered that they saw fit to mention it to the press. It’s rare for a drift-bottle to be found so long after it was set adrift, but I am aware of drifters that have floated longer distances.”

Irish Drift-Bottle found near Murmansk, Russia

Two articles appeared last week in Irish newspapers about a drift bottle from a study that Dr. Edward Monahan established when teaching in what is now the National University of Ireland, Galway, from 1976 to 1986. Links to these articles are appended below. We will not know the particulars of this ballasted bottle’s drift until the unique number on the card in this bottle is distinguished – a hard job to do. But the working hypothesis is that this drift-bottle, found recently on the sea-floor near Murmansk, Russia, was released off the west coast of Ireland during the 1980s!

https://www.irishtimes.com/news/ireland/irish-news/irish-message-in-a-bottle-found-40-years-later-in-russia-1.4709577
https://www.irishexaminer.com/news/arid-40729353.html

A Monumental Day

President Biden restored protections from commercial fishing to the Northeast Canyons and Seamounts Marine National Monument in a ceremony at the White House today. The Monument, originally designated by President Obama in 2016, is home to a tremendous diversity of marine wildlife, from the surface waters with whales and seabirds, into the deep sea with otherworldly fish and deep sea corals. Located 130 miles southeast of Cape Cod, the area includes a spectacular subsea landscape with three submarine canyons and four seamounts. The area was protected from all commercial extraction until President Trump reversed the protections from commercial scale fishing. Research Professor Emeritus Peter Auster, who also holds an appointment as a Senior Research Scientist at Mystic Aquarium, along with colleagues at New England Aquarium, conducted the research demonstrating the conservation value of the area that led to the initial designation as well as a subsequent study of the threats inherent to marine wildlife from fishing. The action by the President restores the only fully protected area in the US waters of the Atlantic Ocean.

https://www.washingtonpost.com/climate-environment/2021/10/07/bears-ears-biden-monument/

Marine Sciences researchers publish long-term zooplankton adaptation experiment

Reposted from UConn Today – https://today.uconn.edu/2021/08/for-copepods-there-is-no-free-lunch-when-coping-with-climate-change/
By Elaina Hancock – UConn Communications | August 26, 2021

The world’s oceans are becoming increasingly stressful places for marine life, and experts are working to understand what this means for the future. From rising temperatures; to acidification as more carbon enters the waters; to changes in the currents; the challenges are multifaceted, making experiments and projections difficult.

Copepods are small marine animals that are abundant, widely dispersed, and serve as major structural components of the ocean’s food web. A team of scientists from the University of Connecticut, Jinan University in China, and the University of Vermont have found that a species of copepod called Acartia tonsa can cope with climate change, but at a price. Their research was published in Nature Climate Change (https://www.nature.com/articles/s41558-021-01131-5).

“We have this problem of climate change and in the ocean, it is a multi-dimensional problem because it’s not just the warming, the ocean is becoming more acidic where pH is going down as we pump more CO2, into the atmosphere. Organisms need to cope, they are under more stress, and things are happening very fast,” says Hans Dam, UConn professor of marine sciences.

Dam explains that previous studies suggest some animals will be more sensitive than others to changes like shifts in pH. Prior studies with copepods showed they are not particularly sensitive to pH changes, but Dam points out those studies were only done with a single generation, or few generations, to a single stressor and shows the ability to acclimate rather than adapt. This new study not only looks at adaptation across 25 generations, it also considered both ocean warming and acidification (OWA), something that few studies have done until now.

“If you want to study the long-term effects, you must consider the fact that animals will adapt to changes or stress in the environment, but to do that you have to do the right experiments. Most people do not do those experiments with animals because it takes a long time to study in multiple generations.”

The researchers looked at fitness, or the ability of a population to reproduce itself in one generation, and how fitness would change through generations in increased OWA conditions. The first generation exposed to new OWA conditions suffered extreme reductions of over 50% of population, says Dam. It was as if OWA was a big hammer that greatly reduced the population fitness. By the third generation, the population seemed to have mostly recovered. However, by the 12th generation, the researchers began to see declines once again.

Though the copepods were able to adapt, the adaptation was limited because fitness was never fully recovered, and the researchers suspect there are some antagonistic interactions at play, leading to a tug of war situation between adaptation to warming and to acidification. These antagonistic interactions complicate predicting what responses can be expected.

James deMayo, co-author and UConn Ph.D. student adds, “Perhaps what’s important to emphasize with this project is that the effects of warming combined with acidification are not the same for every generation or organism that is adapting to that environment. That’s suggested by the data and why the adaptation is limited. While within intermediate generations, organisms might be very well adapted, in later generations, the effects of warming and acidification start to behave differently on the population. That’s one of the exciting parts about the research. It’s not a static, expected result for how organisms or their populations are going to continue to grow or decay.”

For example, deMayo explains, if you took individuals in later generations that had adapted to the experimental OWA conditions and placed them into the conditions of today’s ocean, they would not fare as well.

“That’s one negative consequence, that ability to not tolerate environmental shifts is a cost and an unpredicted consequence for evolutionary adaptation in a lot of systems, not just in copepods,” says deMayo.

The researchers point out that studies looking at single stressors run the risk of making overly simplified inferences about an organism’s ability to adapt, an especially risky proposition when making conclusions about such an integral component of the food web as copepods.

“Particularly when you involve living organisms, there are complexities that you can’t predict,” says Dam. “A priori, you might make the predictions, but you have no certainty that they’re going to unfold that way. In biology these are referred to as ‘emergent properties’ or things that you cannot predict from what you know in advance and this research is a good example.”

In thinking back to the hammer comparison, Dam says impacts in the copepod population have ripple effects through the whole food web and beyond.

“If fitness decreases by say, 10%, down the road we will have a 10% decrease in population size and since these animals are the main food source for fish, a 10% decrease in the world fishery is pretty significant,” says Dam. “And this is really the best-case scenario since in the lab, they’re essentially living in hotel-like conditions so that 10% isn’t taking into consideration other factors like predation or disease. In the real world we could see fitness recovery is actually much worse.”

Additionally, Dam points out another implication is that copepods sequester CO2 and reductions in their numbers reduce the ocean’s carbon sequestration capabilities, bad news at a time when more carbon sequestration is needed.

While the research offers promise for rapid adaptation, it is a reminder that as with many things in nature there’s a catch.

“There is some welcoming news, that yes, there is a recovery of fitness but there is also sobering news that the evolutionary rescue is not complete. There’s no such thing as a free lunch,” says Dam.

 

Professor Senjie Lin on AAAS Member Spotlight

Professor Senjie Lin is profiled on the Member Spotlight of the American Society for the Advancement of Science (AAAS). His research on dinoflagellate biology and its relevance to addressing harmful algal blooms, coral bleaching, and other climate change challenges is highlighted. The Spotlight, which can be found in https://www.aaas.org/membership/member-spotlight/senjie-lin-explores-potential-hidden-answers-tiny-dinoflagellates, also reveals how Lin was drawn to science in general and to dinoflagellate work in particular.

When Life Gives You Lemons … Hold a Virtual International Fish Conference

By Elaina Hancock.
UConn Marine Sciences researcher Hannes Baumann left the 2019 Larval Fish Conference, the 43rd installment of the annual conference, with excitement for the 2020 American Fisheries Society Larval Fish Conference which was to be hosted by UConn. The planning and overall experience has been entirely different than he expected and turned out to be a real “lemons to lemonade” situation, says Baumann.

“For over 40 years, this small but important gathering has happily meandered between North American and European locations. The last in-person conference was 2019 in Palma de Mallorca. A treat. For 2020, I agreed that it now was my turn to organize a Larval Fish Conference. We were so excited, but you know what happened next,” says Baumann.

The 2020 conference had to be canceled outright, and plans started for 2021 in hopes it could be held in-person, but those too were later changed.

“We canceled the June 2020 in-person conference, but naively only postponed it by one year to June 2021, thinking then that one year later, we surely would be done with this virus and all the travel restrictions. So much for that. Again, in March of this year, we had to cancel the 2021 in-person meeting, but replaced it with a three-day virtual meeting that myself and a team organized in the months leading up to the conference.”

The ability to shift gears and ensure forward momentum is a valuable skill the workforce quickly acquired as a result of the pandemic. Baumann says the amount of help and hard work provided by University Events and Conference Services staff to make the switch to virtual has been essential.

“The staff has done a fantastic job with this. You can’t imagine how many things can go wrong, but the staff have solved all of these problems. We all have such gratitude for all their help.”

In pulling everything together, Baumann says the process was both exhausting and rewarding as turnout exceeded expectations.

“The virtual nature of the meeting led to a record diversity of registrants. The conferences were always international, but that meant largely European and North American countries, plus Japan, Australia and New Zealand. This year, we had talks and posters from 28 different countries, a record.”

Technology made it possible: the WebEx platform in particular, coupled with another platform called Gatherly to encourage networking, a difficult-to-replicate experience for virtual meetings.

“Here I was sitting in my New England office on Gatherly and a video chat would pop up with a colleague in British Columbia, when all of a sudden a little avatar joined in and popped up a conversation from New Zealand. Another person from Europe joined after that, and we were talking like we are talking right now. That was so cool, and the participants loved that,” says Baumann.

Happy with how everything turned out, Baumann says, “The top reaction is the technology gods were smiling on us as there were no major glitches and we are very, very, happy for that. I’m a little surprised that everything went so well.”

Benefits of the virtual conference included increased diversity of participants, many who may not have been able to participate otherwise, a reduced carbon footprint, and participants being able to see more talks, since all were recorded. However, Baumann says meeting in-person still can’t be beat.

“This pandemic is particularly hard for early career researchers, like grad students who want to share their research. It’s important to start talking about their research and be in front of people talking about their work. Though responses have been positive, all participants agree on the fact that even the best run virtual conference cannot replace the quality of networking or personal contact that an in-person meeting can deliver.”

Going forward, Baumann says efforts will be made to ensure future conferences have some mixture of both approaches to make sure prospective attendees have their needs met.

“Some participants were really frank in saying they would never be able to attend an in-person meeting far from their own countries. Some could not easily afford the fee for the virtual conference, but we were able to help. Anybody who says, ‘Well, now that we have virtual conferences, the world is on an equal playing field,’ is not seeing the reality that much of the world has not the same resources and internet connectivity than we do here in an institution like UConn.”

Baumann says this is something organizers will have to think carefully about to calibrate, but going forward, scientific conferences may never be quite the same.

Unlearning Racism in Geoscience (URGE) at DMS

The Summer of 2020 was a difficult time. Covid was raging, and tensions were rising as a spotlight was placed on one case of racial injustice after another. It was difficult to believe that there was still such blatant racism in our country – difficult to believe only for those of us who weren’t facing it daily. It’s a privilege to only hear about injustice on the news.

The events of that summer led to changes in our communities and our department. The graduate student officers started an anti-racism journal club to become more educated about racism in our field and how to address it. This club developed into the Marine Science Pod of the Unlearning Racism in Geoscience (URGE) program in January 2021. URGE was put together by NSF and WHOI as a curriculum for addressing and unlearning racism in geosciences, which notably has very low racial diversity in the field. This lack of diversity, which has not increased in 40 years, limits the quality of research potential in the community. The URGE program features multiple two-week long sessions which contain readings and interviews featuring expert opinions and personal experiences. Pod meetings involve discussing these materials and working on assignments (deliverables) as a group. These deliverables are then posted on the pod website publicly. Graduate student Kelly McGarry reflects on the importance and value of this program, “We’re trying to become experts in the ocean, but we’re not experts in racism. That’s not what we spend all day thinking about and studying and reading and writing about. But there are people who do that, it’s their full-time job to understand these different aspects of racism.”

Members of the DMS URGE Pod joined to better understand racism in geosciences, help develop anti-racist strategies, and make use of the resources offered. Graduate student Hannah Collins shares, “I decided to join because I wanted to continue the education and discussion process the graduate students began over the summer in the wake of George Floyd’s murder. I thought that, since one of the objectives of the pod was to develop deliverable action statements and items, we would translate our own educational discussions into tangible goals that we could propose to the department, which I felt was really necessary to combat systemic racism within academia.”

So far there have been 8 sessions which have all covered different aspects of racism, including the history, justice, accessibility, inclusivity, and others. Graduate students in the pod share their experiences on the readings, discussions, and deliverables:

“I feel like a lot of people don’t realize how hard it is to break into geosciences as a whole, but what has been enlightening for me has been thinking about and discussing all of the barriers both big and small that work together to prevent people from underrepresented minorities from advancing in the field. For example, the nature of geosciences means that often field work is a necessary experience to develop skills to be a good scientist and researcher, however fieldwork can be expensive and it’s often easier for oppressive actions and behaviors to occur without repercussions when you’re out in the field.” – Hannah Collins

“One thing that has stood out to me as we discussed specific topics is how similar the experiences are across different topics. Whether we discuss issues of accessibility or inclusivity, much of the literature describes the same trans-disciplinary problems that result in institutional barriers for people of color in STEM.” – James DeMayo

“It is through the session deliverables that I have been able to learn about the many resources out there that UConn offers to tackle or handle matters of racism.” – Michael Mathuri

Addressing racism in our field does not stop with the end of the URGE program. After the program ends, pod members aim to continue to hold the anti-racism journal club from last summer, and plan on actively working with the department as a whole to become more inclusive. Jimmy DeMayo shares, “The group has plans to help draft new, prominently displayed, codes of conduct for the department that communicate the department positions on matters of diversity, equity, and inclusion. We are also exploring new ways of advertising available studentships and job positions that help reduce the barrier to entry for students of color interested in marine science.” The department and university support this goal and has signed an agreement signifying support – which can be found here.

URGE DMS Pod