Later this year, Dr. César Rocha will be starting as a new assistant professor in the Department of Marine Sciences (DMS). DMS has been searching for new physical oceanographers to join the ranks of the faculty. It is with great enthusiasm that we welcome César to the University of Connecticut and to the scenic Avery Point campus.

Professor Rocha is currently a postdoctoral fellow at the Woods Hole Oceanographic Institution. In 2018, he received his Ph.D. in Physical Oceanography from the Scripps Institution of Oceanography at University of California, San Diego. Before then, he studied at University of São Paulo in Brazil, where he completed his B.S. in Oceanography and M.Sc. in Physical Oceanography.

Rocha, who hails from Brazil, reflected that his childhood played a large role in his decision to study the ocean. “Even though I grew up in a landlocked city, I used to spend every summer in my family’s house on Brazil’s Green Coast.” He continued, “in those lengthy vacations, I developed an awe for the ocean and this led me to pursue oceanography in college.”

He started oceanographic research as an undergraduate and “never stopped.” Along the way, he is glad to have had “wonderful mentors” to help shape his academic and professional career. Currently, Rocha’s research interests lie in mesoscale and sub-mesoscale flows in the ocean. This scale ranges from 1 to 100 kilometers and includes features such as eddies, fronts, and filament flows of the mixed layer and pycnocline, the layer of the ocean characterized by large density differences. Flows may originate at large scales and cascade to smaller ones, which mix the ocean and cause turbulence. Rocha explains, “Turbulent oceanic flows are responsible for both horizontal and vertical transport of properties such as heat, freshwater, nutrients, and biogeochemical tracers.”

While in graduate school, Rocha was a NASA Earth and Planetary Sciences Graduate Fellow. At UConn, he will continue his relationship with NASA through two NASA-related projects. The first will investigate sub-mesoscale eddies that are generated near topographic features on the ocean floor, which is a part of the Surface Water and Ocean Topography (SWOT) Mission. The second will be with the Submesoscale Ocean Dynamics Experiment (S-MODE), in which he and collaborators will deploy a flotilla of Saildrones, wind and solar-powered uncrewed surface vehicles, to study vertical transport in kilometer-sized fronts of the California Current.

Beyond research, Rocha is enthusiastic about teaching and mentoring. “I enjoy breaking down and distilling complicated concepts and explaining them to others,” he said. “I am committed to continuing to develop myself as an effective instructor.” He plans to create a new hands-on course called Research Computing in Marine Sciences, in order to teach data science and analytical tools in Python.

Rocha is looking forward to the personal and interdisciplinary community at DMS. “I like the idea of being in a department that is big enough to have a robust graduate and research programs, yet small enough so we get to know everybody,” he said. “I am eager to interact with colleagues from all areas of marine sciences.”

In his spare time, Rocha is working on his culinary skills. He also voraciously reads in both English and his native Portuguese. One of his favorite American publications is The New Yorker, for its fascinating and well-produced content.

On the first floor of the Marine Sciences Building, it’s hard to miss the office door belonging to Kay Howard-Strobel because of its humorous sticker, “SAVE THE CRABS, THEN EAT ‘EM.” If you haven’t met Kay, you’ll probably be familiar with some the activities she’s been involved with at Avery Point.

Kay received her bachelors from the University of Mary Washington, where she majored in biology and geology. Then she completed her masters from the Virginia Institute of Marine Sciences (VIMS) in marine geology. Her thesis looked at Chesapeake Bay mud by using spatial autocorrelation to characterize dredge disposal sites in the Chesapeake Bay. “I found sand and mud was even way more fun than rocks and minerals,” she commented.

How Kay got to UConn is an interesting coincidence: “While at VIMS – one of my advisors hosted a visiting professor named Frank Bohlen,” she said. “After graduate school, I moved to Rhode Island with my husband and sent Frank a letter – and here I still am.” For 30 years, Kay has been a researcher in DMS, the first half working with Frank and second with Jim O’Donnell.

Currently, Kay manages, maintains, and configures various oceanographic instruments for field observations, including portable and mooring Acoustic Doppler Current Profilers (ADCPs), profiling and stationary Conductivity-Temperature-Depth (CTDs) sensors, suspended sediment sensors, Autonomous Underwater Vehicles (AUVs) and gliders, nutrient sensors, buoys, and more.

Kay deploys and recovers these sensors on all types of field campaigns too. Work in the field is very weather dependent and preparation constant, so she is ready to go on a moment’s notice. The variety of field work Kay has done is staggering. She said, “Every project is memorable in some way, shape or form…  whether traipsing through marshes and walking amongst reef balls with graduate students, deploying buoys in western LIS off the R/V Connecticut at the crack o’ dawn, squeezing under bridges on the Maritime Skiff, riding flood-gate currents in a johnboat, or running CTD profiles down the Sound on a flat, calm summer day on the Osprey… they’re all good.”

Throughout her three decades at UConn, Kay has been a part of many significant observational projects. One in particular is the Long Island Sound Coastal Observatory, now know as the Long Island Sound Integrated Coastal Observing System (LISICOS). Initially, it started as a buoy in the Thames River that transmitted data in real-time back to Avery Point, which she and David Cohen developed. Now, LISICOS is an interdisciplinary network of buoys, radar, weather stations, and water quality measurements. Public, private, and state users have to come to rely on that data for recreation, policy, and monitoring

Kay also enjoys CrossFit and playing soccer. She is one of the longest standing, most valuable members of the Department’s Friday afternoon pick-up soccer games.

DMS is enriched by and fortunate to have Kay Howard-Strobel as an expert observationalist in our midst.

It has been over 50 years since the University of Connecticut established Avery Point as a regional campus and nearly 40 years since the formalization of the Department of Marine Sciences (DMS). At that time, national feminist and civil rights movements were in full swing as well. In the decades that followed, especially the past 20 years, a primary focus of these movements has been increasing and retaining diversity in science, technology, engineering, and mathematics (STEM), which includes oceanography. Since the early 2000s, DMS has successfully narrowed the gender-gap among faculty members.

Barbara Welsh was the first female faculty member in DMS. She was hired in the 1980s and helped establish hypoxia monitoring and nitrogen management programs in Long Island Sound. Her research revealed phytoplankton blooms and the resulting alarmingly low oxygen concentrations in Western Long Island Sound in the summer.

The next female professor to join was Annelie Skoog, who studies marine organic matter cycling. Another early female leader was Associate Professor in Residence Patricia Kremer, who studied gelatinous plankton. After Barbara retired, Annelie remained the only tenured female faculty member. All other women faculty were research scientists and not professors. The most common title being Research Professor, with levels assistant, associate and full.

A few members of the department recalled a faculty meeting in 2002, in which half the members present were women. However, as the only female tenure-track professor present, Annelie was the only woman allowed a vote.

As a part of larger UConn initiatives to promote diversity and opportunities for underrepresented groups, DMS sought to grow as a department and recruit talented new faculty for hire. In 2005, Ann Bucklin became the first female department head and lead many efforts to formalize department proceedings.

Since then, Heidi Dierssen, Penny Vlahos, Julie Granger, Kelly Lombardo (who moved to Penn State University in 2019), Melanie Fewings (who moved to Oregon State University in 2018), Samantha Siedlecki, and Catherine Matassa have joined the tenure-track faculty ranks.

Additionally, Sandy Shumway, Jamie Vaudrey, and Jennifer O’Donnell have been members of the research faculty and key contributors to the Department. Claudia Koerting has been an integral part of developing the undergraduate program and maintaining instrumentation. A partnership with Mystic Aquarium added four women – all active and successful marine researchers – as affiliate faculty-in-residence: Tracy Romano, Maureen Driscoll, Laura Thompson, and Ebru Unal.

After conversations with many of these stellar scientists, it became clear that the culture in science overall has shifted greatly. Both Claudia and Penny commented that neither of them had any female professors throughout their entire academic careers. Whereas current graduate and undergraduate students can attest that female professors in the sciences are now entirely usual. However, disparities among different scientific disciplines remain. Today, the percent of people in physics and engineering identifying as female at the doctorate level is approximately 20% (Women in Physics and Astronomy 2019 Report, American Institute of Physics).

The culture that has been cultivated and continues to grow in DMS strives for diversity, inclusion, and equity on all academic levels including students, staff, and faculty.

On a final note, here are some statistics based on current departmental records. As of April 2020, all four research staff, six of eight postdoctoral research associates, 7 of 18 tenured or tenure track faculty, and four of five research faculty are women.

It’s finally springtime in the Northeast USA, so gardeners are looking to fertilize their plants and flowers. Have you ever stopped to wonder what is actually in the big bags of soil you spread on your lawn?

In most cases, it is a mixture of nitrogen and phosphorus. Both are limiting nutrients for the base of the food chain, aka plants. Phosphorus makes its way into soil and the ocean through weathering of rocks. Nitrogen, on the other hand, is trickier, because although it makes up over 70% of the atmosphere, this gaseous form (N₂) is unusable by plants and animals.

So how does nitrogen get from the atmosphere into a usable form? The process is called “nitrogen fixation.” On land, bacteria in soil do the heavy lifting by converting N₂ into organic nutrients like ammonium (NH₄⁺) and nitrate (NO₃^–) that are usable by plants. In the ocean, blue-green cyanobacteria are the most abundant type of bacteria to fix nitrogen. Collectively, these organisms are called diazotrophs, and account for close to 90% of natural nitrogen fixation.

In a recent collaborative publication, Associate Professor Julie Granger and Professor Craig Tobias contributed their expertise on the nitrogen cycle in the ocean. The study included scientists from various institutions and focused on standardizing procedures for measuring diazotrophic activity in field sample incubations.

Oceanographers are interested in understanding the magnitude and rate of nitrogen fixation by diazotrophs. These rates vary significantly depending on the location, whether coastal or open ocean, poles or equator, shallow or deep. Ultimately, scientists aim to evaluate what controls the reservoir of nitrogen in the ocean from measurements and its influence on ocean fertility. Unfortunately, researchers currently employ differing techniques, causing uncertainty in whether estimates of nitrogen fixation rates are inter-comparable among research groups and among ecosystems.

Granger, Tobias and colleagues focus on the ¹⁵N₂ tracer method for this study. Therein, water samples from a particular depth and region of the ocean are incubated and supplemented with isotopically-labeled nitrogen gas (¹⁵N₂ gas).

Isotopes refer to the different masses an element can have depending on its atomic structure. Nitrogen can have atomic mass of 14 or 15, which are referred to as ¹⁴N or ¹⁵N. Naturally occurring nitrogen is predominantly ¹⁴N, such that adding a dollop of ¹⁵N can facilitate the tracking of nitrogen transformations.

During incubation, living diazotrophs in the water samples convert nitrogen gas (including the labeled ¹⁵N-gas) into nitrogen nutrients. At the end of the incubation, the isotopic composition (whether ¹⁴N or ¹⁵N) of the newly “fixed” nitrogen is measured. This method allows scientists to track the amount and rate of atmospheric nitrogen gas that was converted into nitrogen nutrients at a particular ocean location.

Over the years, renditions of the ¹⁵N₂ tracer method have been conceived, including some with questionable practices. As not all are created equal, Granger, Tobias and co-authors ultimately recommend the so-called “dissolution” and the “bubble release” methods over others.

Additionally, Granger and Tobias stress the importance of adhering to proven mass spectrometric procedures to quantify ¹⁵N, which is crucial for obtaining representative estimates.

The paper thus states, “While the research community may remain divided as to which variant of the method to follow, the standardization of some key practices will enable intercomparability among estimates, to better discern temporal and biogeographical trends, as well as environmental controls on ocean N₂ fixation.”

While both Granger and Tobias are proud of the resulting document, they agree that they will never again engage in the Herculean effort that is achieving consensus: “Herding cats is harder than science.”

Citation:

White, A.E., Granger, J., Selden, C., Gradoville, M.R., Potts, L., Bourbonnais, A., Fulweiler, R.W., Knapp, A.N., Mohr, W., Moisander, P.H., Tobias, C.R., Caffin, M., Wilson, S.T., Benavides, M., Bonnet, S., Mulholland, M.R. and Chang, B.X. (2020), A critical review of the ¹⁵N₂ tracer method to measure diazotrophic production in pelagic ecosystems. Limnol Oceanogr Methods. doi:10.1002/lom3.10353

Since the last edition of the newsletter, there has been plenty to celebrate and recognize in the department! Here you’ll find recent publications, new grants, undergraduate achievements, and awards in the Department of Marine Sciences from October 2019 through April 2020.

Awards	Description
Prof. Heidi Dierssen	Dierssen was awarded with a membership in the Connecticut Academy of Sciences and Engineering. She also was selected as team leader for the PACE (Plankton, Aerosol, Cloud, and ocean Ecosystems) NASA mission.
Prof. Peter Auster	Auster served on the Ecological Experts Working Group for development of the Long Island Sound Blue Plan. The Blue Plan is an effort to implement marine spatial planning to address conflicting human uses of Long Island Sound while conserving natural resources.
Prof. in Residence Ralph Lewis	Ralph Lewis received the Dr. Joe Webb Peoples Award from the Geological Society of Connecticut for his contributions to the understanding of Connecticut’s geology over the past 40 years.
Prof. Robert Mason	Mason became Chief Editor for the inorganic pollutants section in the new Frontiers journal Frontiers in Environmental Chemistry.

Edward C. Monahan Symposium

Thursday, July 25^th, 2019

In the old-world tradition of a Festschrift, i.e., a celebration and book honoring the life and achievements of outstanding academics, the Department of Marine Sciences celebrated Dr. Edward C. Monahan in a full day symposium. Colleagues from Ed’s many years at UConn and Connecticut Sea Grant recounted entertaining anecdotes and his many accolades. Outside of academia, friends shared stories about his intense love for rowing crew and his involvement in local politics. One of the shining moments of the day included a photo montage of Ed’s facial hair throughout the years. Two beautiful quilts, crafted by Ed’s wife Elizabeth, were displayed throughout the festivities. One quilt captured rolling waves, the pattern being different shapes for different words for white caps. The other quilt displayed every institutional emblem in chronological order at which Dr. Monahan worked.

Dr. Monahan studied at Cornell University as an undergraduate in Engineering Physics, and continued onto his Ph.D. in Oceanography at the Massachusetts Institute of Technology, where he focused on the correlation between sea spray, whitecap coverage, and wind speed. His career brought him across the world to Ireland, where he completed another Doctorate of Science at the National University of Ireland. For two decades, he led the Connecticut Sea Grant program at UConn as its Director and initiated international marine sciences exchanges. In his retirement, Ed has not slowed down his scholarly productivity. He continues to publish scientific journal articles, remains active in the department, and stays abreast of all things oceanography by attending weekly seminars and brown bag presentations.

Dr. Penny Vlahos, chair of the symposium organizing committee, commented, “Ed and I have collaborated since I started as junior faculty. I thought it was appropriate to honor him and recognize his achievements and contributions. His work is still being cited today, especially by climate scientists in IPCC [Intergovernmental Panel on Climate Change] reports.”

Some wonderful words come from Peg Van Patten, retired communications director for Connecticut Sea Grant, “Ed Monahan was my supervisor as Director of Connecticut Sea Grant for two decades, but he was really more than that.  Ed became my mentor, and friend, and sometimes my co-author. I learned so much from his experience that I was delighted when Professor Vlahos asked me to help organize a symposium in his honor.  The day was a perfect tribute to Ed’s remarkable career and many accomplishments.”

Throughout the symposium, selected guests gave scientific talks on topics related to Ed’s research interests: sea spray, white caps, and air-sea interaction. Other speakers included grant recipients from Connecticut Sea Grant, collaborators, rowing partners, and students. In his retirement, Ed helped organize Coastsweek Regatta, a local rowing competition in Mystic, with 2019 marking the 28^th consecutive year. At the closing of the day, attendees, family and friends enjoyed celebratory beverages and birthday cake appropriately decorated with a large wave. Allison Staniec, a current Ph.D. student who works directly with Ed, summarized the day quite well: “The Monahan Symposium (Twixt Wind and Waves) was an enjoyable celebration of Ed’s past and ongoing career with plenty of time for ground breaking science and entertaining anecdotes. And cake!”

The Festschrift book, “Recent Advances in the Study of Oceanic Whitecaps,” edited by P. Vlahos and E. C. Monahan (Honorary Editor) will be published by Springer Nature shortly.

Although the academic year is over by mid-May, the Department of Marine Sciences does not take a summer vacation. Outreach, research trips, summer interns, and more activities keep Marine Sciences bustling during the summertime. Included here are just a few of the programs from summer 2019.

Marine Sciences and Mystic Aquarium REU program

This year marked the last class in the inaugural cycle of our new NSF funded Research Experience for Undergraduate (REU) program with the Mystic Aquarium. Our REU students came from all corners of the country: California, Florida, Iowa, and Maine. Eight REU students were paired with Marine Sciences Faculty or Mystic Aquarium researchers on projects that spanned all levels of the marine food web. The program provides students with housing, a stipend for working full-time in a lab and for food, and all transportation. The students just focus on conducting science! This year featured new collaborative projects between DMS and the Aquarium, such as the first ever documentation of ciliate diversity and population dynamics of Beluga Whale blowhole spit. The Marine Sciences Graduate Student Organization also integrated itself into the REU program by providing invaluable peer support for oral and poster presentation experience. After a laudatory site visit by the NSF program manager, we were encouraged to apply for another four years of funding and to increase the number of students to 10. Our fingers are crossed we can continue this exciting and rewarding program.

STEM Success and Student Support Services

STEM Success, the undergraduate retention program for incoming Science Technology Engineering Mathematics (STEM) students, returned this summer! Fourteen in-coming undergraduate students enrolled, who are either first-generation college students, from low-income households, part of underrepresented populations within UConn, or in need of some extra academic support.

For four weeks, students participated in eight workshops, twice-a-week, that were designed to promote discussion amongst peers and with graduate students on STEM subjects and life at Avery Point. Activities ranged from performing titrations, carrying out plankton tows, introducing programming, and learning how to use a microscope. This enabled the incoming undergraduates to become familiar with basic scientific concepts and laboratory etiquette, readying them for their science classes this Fall. The primary goal was to add another layer of support for these students by fostering connections with their peers and their future teaching assistants.

For the second year in a row, the STEM Success program occurred alongside the intensive five-week Student Support Services summer program directed by Aaron Collins. Twice as many marine sciences graduate students got involved this year to lead the workshops. STEM Success has been designed and coordinated by Dr. Emma Cross the previous two years and she is now handing over the reins to Dr. Lisa Nigro. Our graduate students were super enthusiastic and all the incoming first-years enjoyed and found the program useful!

Pre-college at Avery Point

The Department of Marine Sciences participated in UConn’s pre-college summer program for the second time. The program, titled “marine biology and oceanography” enrolled 17 students from Connecticut, Massachusetts, New York and Saudi Arabia (by way of New Hampshire). The students stayed in Storrs and were transported to Avery Point during the week. Students’ favorite activities included taking water quality measurements around Pine Island off the R/V Lowell Weicker, exploring invertebrate ecology from settling plates, going on a behind the scenes tour of the Aquarium, and dissecting dogfish. Instructors were Claudia Koerting and John Hamilton. The program ran the last full week of July.

UConn Summer Undergraduate Research Fund (SURF) Awards

Each summer, UConn awards close to 50 undergraduates with financial support to explore a research project of their own device through the Summer Undergraduate Research Fund (SURF). Over the last few years, Marine Sciences undergraduate students have consistently received recognition. This year, seniors Mackenzie Blanusa and Annalee Mears were fully funded for summer research. Mackenzie combined atmospheric science and chemical analysis in her project entitled, “The Effect of Storm Type and Source Region on the Chemical Composition of Precipitation along the Long Island Sound Coastline.” Dr. Kelly Lombardo and Dr. Zofia Baumann mentored and guided her research. Annalee worked with Dr. Catherine Matassa on a project about predator-prey interactions called, “Stoichiometry of Fear: Do Predators Affect the Balance of Carbon and Nitrogen in their Prey?” Previous SURF recipients include Clare Schlink (2018), Sarah McCart (2017) and Jessica Hinckley (2019). We are proud of our undergraduates for their great contributions!

Since the last newsletter edition, many members of the Department of Marine Sciences were awarded grants, published articles, and received fellowships and awards. Congratulations to everyone on their remarkable achievements! All are presented in alphabetical order by last name.

Publications:

 Fellowships:

Grants:

 Awards: